Sequence Similarity Clusters for the Entities in PDB 1IPK

Entity #1 | Chains: A,B,C
BETA-CONGLYCININ, BETA CHAIN protein, length: 416 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 15111
95 % 3 3 6816 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 6781
70 % 7 7 3193
50 % 13 15 1655
40 % 16 19 1306
30 % 17 20 1281

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1UIJ 1 A, B, C, D, E, F beta subunit of beta conglycinin 3847
2 1IPJ 1 A, B, C BETA-CONGLYCININ, BETA CHAIN 3847
3 1IPK 1 A, B, C BETA-CONGLYCININ, BETA CHAIN 3847