Sequence Similarity Clusters for the Entities in PDB 1IPK

Entity #1 | Chains: A,B,C
BETA-CONGLYCININ, BETA CHAIN protein, length: 416 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26280
95 % 3 3 5567 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 5583
70 % 7 7 2852
50 % 12 14 1510
40 % 12 14 1525
30 % 15 18 1213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2EA7 1 A, B, C 7S globulin-1 3914
2 2EAA 1 A, B, C 7S globulin-3 3914
3 1UIK 1 A, B, C alpha prime subunit of beta-conglycinin RESIDUES 142-559 3847
4 2CV6 1 A Seed storage protein 157791
5 1UIJ 1 A, B, C, D, E, F beta subunit of beta conglycinin 3847
6 1IPJ 1 A, B, C BETA-CONGLYCININ, BETA CHAIN 3847
7 1IPK 1 A, B, C BETA-CONGLYCININ, BETA CHAIN 3847