Sequence Similarity Clusters for the Entities in PDB 1IPK

Entity #1 | Chains: A,B,C
BETA-CONGLYCININ, BETA CHAIN protein, length: 416 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 14429
95 % 3 3 6517 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 6500
70 % 7 7 3050
50 % 13 15 1588
40 % 15 18 1296
30 % 16 19 1263

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1IPJ 1 A, B, C BETA-CONGLYCININ, BETA CHAIN 3847
2 1IPK 1 A, B, C BETA-CONGLYCININ, BETA CHAIN 3847