Sequence Similarity Clusters for the Entities in PDB 1IPK

Entity #1 | Chains: A,B,C
BETA-CONGLYCININ, BETA CHAIN protein, length: 416 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32979
95 % 3 3 6957 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 6943
70 % 7 7 3311
50 % 13 15 1719
40 % 13 15 1765
30 % 17 20 1398

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures