Sequence Similarity Clusters for the Entities in PDB 1IPK

Entity #1 | Chains: A,B,C
BETA-CONGLYCININ, BETA CHAIN protein, length: 416 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25659
95 % 3 3 5441 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 5457
70 % 7 7 2780
50 % 12 14 1476
40 % 12 14 1492
30 % 14 17 1213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.