Sequence Similarity Clusters for the Entities in PDB 1IPJ

Entity #1 | Chains: A,B,C
BETA-CONGLYCININ, BETA CHAIN protein, length: 416 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25790
95 % 2 3 5466 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 3 5482
70 % 6 7 2804
50 % 11 14 1487
40 % 11 14 1501
30 % 14 18 1193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures