Sequence Similarity Clusters for the Entities in PDB 1IPB

Entity #1 | Chains: A
EUKARYOTIC TRANSLATION INITIATION FACTOR 4E protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 19 1824
95 % 4 19 2139 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 4 19 2192
70 % 4 19 2209
50 % 4 19 2217
40 % 4 19 2185
30 % 4 19 2060

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5T46 1 A, C Eukaryotic translation initiation factor 4E 9606
2 5EI3 1 A Eukaryotic translation initiation factor 4E 9606
3 1IPC 1 A EUKARYOTIC TRANSLATION INITIATION FACTOR 4E 9606
4 1IPB 1 A EUKARYOTIC TRANSLATION INITIATION FACTOR 4E 9606
5 3U7X 1 A, B Eukaryotic translation initiation factor 4E 9606
6 2V8Y 1 A, E EUKARYOTIC TRANSLATION INITIATION FACTOR 4E 9606
7 3TF2 1 A, B, C, D Eukaryotic translation initiation factor 4E 9606
8 2V8W 1 A, E EUKARYOTIC TRANSLATION INITIATION FACTOR 4E 9606
9 2V8X 1 A, E EUKARYOTIC TRANSLATION INITIATION FACTOR 4E 9606
10 2W97 1 A EUKARYOTIC TRANSLATION INITIATION FACTOR 4E 9606
11 2W97 2 B EUKARYOTIC TRANSLATION INITIATION FACTOR 4E 9606
12 4AZA 1 A, C EUKARYOTIC TRANSLATION INITIATION FACTOR 4E 9606
13 5EHC 1 A Eukaryotic translation initiation factor 4E 9606
14 4DT6 1 A Eukaryotic translation initiation factor 4E 9606
15 4BEA 1 A EUKARYOTIC TRANSLATION INITIATION FACTOR 4E 9606
16 4DUM 1 A Eukaryotic translation initiation factor 4E 9606
17 5EIR 1 A Eukaryotic translation initiation factor 4E 9606
18 5EKV 1 A, C Eukaryotic translation initiation factor 4E 9606
19 2GPQ 1 A Eukaryotic translation initiation factor 4E 9606