Sequence Similarity Clusters for the Entities in PDB 1IPB

Entity #1 | Chains: A
EUKARYOTIC TRANSLATION INITIATION FACTOR 4E protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 18 1626
95 % 4 19 2065 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 4 19 2116
70 % 4 19 2124
50 % 4 19 2124
40 % 4 19 2129
30 % 4 19 2039

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures