Sequence Similarity Clusters for the Entities in PDB 1IOW

Entity #1 | Chains: A
D-ALA\:D-ALA LIGASE protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56276
95 % 4 6 7674 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 4 6 7618
70 % 5 12 1852
50 % 6 17 1084
40 % 6 17 1097
30 % 6 45 476

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures