Sequence Similarity Clusters for the Entities in PDB 1IOW

Entity #1 | Chains: A
D-ALA\:D-ALA LIGASE protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54780
95 % 4 6 7443 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 4 6 7398
70 % 5 12 1802
50 % 6 17 1051
40 % 6 17 1067
30 % 6 45 463

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.