Sequence Similarity Clusters for the Entities in PDB 1IOW

Entity #1 | Chains: A
D-ALA\:D-ALA LIGASE protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57059
95 % 4 6 7789 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 4 6 7733
70 % 5 12 1894
50 % 6 17 1096
40 % 6 17 1111
30 % 6 45 481

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures