Sequence Similarity Clusters for the Entities in PDB 1IOV

Entity #1 | Chains: A
D-ALA\:D-ALA LIGASE protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 8176
95 % 5 6 8245 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 6 8177
70 % 6 12 1972
50 % 9 19 1052
40 % 9 19 1062
30 % 14 49 481

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures