Sequence Similarity Clusters for the Entities in PDB 1IOV

Entity #1 | Chains: A
D-ALA\:D-ALA LIGASE protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 8345
95 % 5 6 7572 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 6 7523
70 % 6 12 1825
50 % 7 17 1068
40 % 7 17 1080
30 % 12 45 467

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.