Sequence Similarity Clusters for the Entities in PDB 1IOE

Entity #1 | Chains: A
COAGULATION FACTOR XA protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 113 119 214
95 % 126 134 256
90 % 126 134 270
70 % 127 135 301
50 % 661 683 14
40 % 1590 1696 4
30 % 1726 1846 6
Entity #2 | Chains: L
COAGULATION FACTOR XA protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 25 1319
95 % 21 26 1671 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.2
PDBFlex
90 % 21 26 1707
70 % 21 26 1732
50 % 21 26 1774
40 % 23 31 1478
30 % 23 31 1455

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.