Sequence Similarity Clusters for the Entities in PDB 1INN

Entity #1 | Chains: A,B
AUTOINDUCER-2 PRODUCTION PROTEIN LUXS protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 9588
95 % 3 5 9731 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 3 5 9617
70 % 3 5 9185
50 % 3 5 8302
40 % 4 10 3095
30 % 4 10 2901

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures