Sequence Similarity Clusters for the Entities in PDB 1IMV

Entity #1 | Chains: A
PIGMENT EPITHELIUM-DERIVED FACTOR protein, length: 398 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54966
95 % 1 1 40006
90 % 1 1 38179
70 % 1 1 33898
50 % 1 1 28976
40 % 1 1 25620
30 % 117 180 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures