Sequence Similarity Clusters for the Entities in PDB 1IMD

Entity #1 | Chains: A,B
INOSITOL MONOPHOSPHATASE protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 3097
95 % 9 9 3825 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.5
PDBFlex
90 % 9 9 3879
70 % 11 11 2772
50 % 12 16 1807
40 % 12 16 1815
30 % 28 36 685

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures