Sequence Similarity Clusters for the Entities in PDB 1IM8

Entity #1 | Chains: A,B
YecO protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39426
95 % 1 1 30387 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 29320
70 % 3 3 11451
50 % 3 3 10254
40 % 3 3 9311
30 % 3 3 8134

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures