Sequence Similarity Clusters for the Entities in PDB 1IL1

Entity #1 | Chains: A
monoclonal antibody G3-519 (heavy chain) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50280
95 % 1 1 41623
90 % 1 1 39648
70 % 756 2475 2
50 % 1566 5101 1
40 % 1829 5750 1
30 % 2239 7168 1
Entity #2 | Chains: B
monoclonal antibody G3-519 (light chain) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50348
95 % 7 11 3461 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 37 91 269
70 % 763 2516 1
50 % 1567 5101 1
40 % 1830 5750 1
30 % 2240 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures