Sequence Similarity Clusters for the Entities in PDB 1IKJ

Entity #1 | Chains: A
NITROPHORIN 4 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 25 40 1094
95 % 30 48 1090 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 30 54 867
70 % 30 54 916
50 % 30 54 961
40 % 31 76 707
30 % 31 79 593

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures