Sequence Similarity Clusters for the Entities in PDB 1IKG

Entity #1 | Chains: A
D-ALANYL-D-ALANINE CARBOXYPEPTIDASE protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 15 3609
95 % 14 15 4388 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 14 15 4418
70 % 14 15 4332
50 % 14 15 4172
40 % 14 15 3990
30 % 15 16 3464

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures