Sequence Similarity Clusters for the Entities in PDB 1IK9

Entity #1 | Chains: A,B
DNA REPAIR PROTEIN XRCC4 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40419
95 % 1 3 9206
90 % 1 3 9113
70 % 4 9 2532
50 % 4 9 2506
40 % 4 9 2466
30 % 4 9 2343
Entity #2 | Chains: C
DNA LIGASE IV protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72984
95 % 1 1 50861
90 % 1 1 48294
70 % 1 1 42370
50 % 1 1 36172
40 % 1 1 31866
30 % 1 1 26978

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.