Sequence Similarity Clusters for the Entities in PDB 1IK9

Entity #1 | Chains: A,B
DNA REPAIR PROTEIN XRCC4 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 41586
95 % 1 3 9445
90 % 1 3 9340
70 % 4 9 2620
50 % 4 9 2593
40 % 4 9 2549
30 % 4 9 2411
Entity #2 | Chains: C
DNA LIGASE IV protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74896
95 % 1 1 52149
90 % 1 1 49464
70 % 1 1 43297
50 % 1 1 36927
40 % 1 1 32524
30 % 1 1 27548

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures