Sequence Similarity Clusters for the Entities in PDB 1IK8

Entity #1 | Chains: A
LONG NEUROTOXIN 1 protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 20 2682
95 % 15 26 1865
90 % 16 27 1765
70 % 16 27 1784
50 % 23 38 1190
40 % 81 124 313
30 % 82 126 312

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1V6P 1 A, B Cobrotoxin 8656
2 1VB0 1 A Cobrotoxin b 8656
3 3NDS 1 A Short neurotoxin 1 ENGINEERED TOXIN ALPHA 8658
4 3NEQ 1 A, B Three-finger muscarinic toxin 7 8618
5 3EBX 1 A ERABUTOXIN B 8631
6 3FEV 1 A, B, C Fusion of Muscarinic toxin 1, Muscarinic m1-toxin1 8618
7 2VLW 1 A, B MUSCARINIC M1-TOXIN1 DI-IODO TYROSINE AT POSITION 51 8618
8 1QKD 1 A, B ERABUTOXIN A 8631
9 1QKE 1 A ERABUTOXIN A 8631
10 1TGX 1 A, B, C GAMMA-CARDIOTOXIN 8654
11 1ONJ 1 A Cobrotoxin b 8656
12 1FF4 1 A MUSCARINIC TOXIN/ACETYLCHOLINE RECEPTOR BINDING PROTEIN 8618
13 3HH7 1 A, B Muscarinic toxin-like protein 3 homolog 8665
14 3ERA 1 A, B ERABUTOXIN A 8631
15 1FAS 1 A FASCICULIN 1 8618
16 6EBX 1 A, B ERABUTOXIN B 8631
17 1UG4 1 A Cytotoxin 6 8656
18 2ERA 1 A ERABUTOXIN A 8631
19 1IQ9 1 A alpha-neurotoxin 8654
20 4DO8 1 A, B Muscarinic toxin 1 Muscarinic toxin 1 8618
21 1HC9 1 A ALPHA-BUNGAROTOXIN ISOFORM V31 ALPHA-NEUROTOXIN 8616
22 1HC9 2 B ALPHA-BUNGAROTOXIN ISOFORM A31 8616
23 5MG9 1 A AncTx1-W28R/I38S Putative ancetral mamba toxin, Residues 1 to 6 (LEU THR CYS VAL LYS SER ) match to UNP Q8QGR0 NXM11_DENAN 22 to 28, Residues 7 to 11 (LYS SER ILE PHE GLY ) match to UNP P85092 TXAD1_DENAN 7 to 11, Residues 12 to 17 (VAL THR THR GLU ASP CYS ) match to UNP P18328 TXM2_DENAN 12 to 17, Residues 18 to 26 (PRO ASP GLY GLN ASN LEU CYS PHE LYS ) match to UNP P81030 TXM1_DENAN 18 to 26, Residues 27 to 31 (ARG ARG HIS TYR ILE ) match to UNP P86419 3SI1B_DENAN 27 to 31, Residues 32 to 34 (VAL PRO LYS ) match to UNP P85092 TXAD1_DENAN 32 to 34, Residues 35 to 37 (MET TYR ASP ) match to UNP Q8QGR0 NXM11_DENAN 56 to 58, Residues 38 to 48 (SER THR ARG GLY CYS ALA ALA THR CYS PRO ILE ) match to UNP P85092 TXAD1_DENAN 38 to 48, Residues 49 to 50 (ALA GLU ) match to UNP Q8QGR0 NXM11_DENAN 61 to 62, Residues 51 to 54 (ASN ARG ASP VAL ) match to UNP P82462 3SUC1_NAJKA 51 to 54, Residues 55 to 58 (ILE HIS CYS CYS ) match to UNP P85092 TXAD1_DENAN 55 to 58, Residues 59 to 62 (GLY THR ASP LYS ) match to UNP P18328 TXM2_DENAN 59 to 62, Residues 63 to 65 (CYS ASN GLU ) match to UNP P85092 TXAD1_DENAN 63 to 65, 8618
24 4IYE 1 A Toxin AdTx1 Rho-Da1a 8618
25 1NTN 1 A NEUROTOXIN I 8657
26 5EBX 1 A ERABUTOXIN A 8631
27 1FSC 1 A FASCICULIN 2 8618
28 2QC1 1 A Alpha-bungarotoxin 8616
29 1H0J 1 A, B, C CARDIOTOXIN-3 SODIUM DODECYL SULFATE 8656
30 4AEA 1 A, B LONG NEUROTOXIN 1 8649
31 1QM7 1 A R-CHII FULLY ENGINEERED PROTEIN CONTAINING 41% RESIDUES FROM FASCICULIN 2,25% FROM ALPHA-TOXIN, 34% CONSERVED BETWEEN THE TWO NATURAL TOXINS 32630
32 2H8U 1 A, B Bucain 92438
33 1KXI 1 A, B CARDIOTOXIN V 8656
34 1KBA 1 A, B KAPPA-BUNGAROTOXIN 8616
35 2CTX 1 A ALPHA-COBRATOXIN 35670
36 2BHI 1 A, B CYTOTOXIN 3 8656
37 1CDT 1 A, B CARDIOTOXIN VII4 8644
38 4EY8 2 B Fasciculin-2 8618
39 1XT3 1 A, B Cytotoxin 3 8656
40 3PLC 1 A, B, C Beta-cardiotoxin OH-27 8665
41 4OM5 1 A, B, C, D Cytotoxin 4 UNP residues 22-81 8656
42 3VTS 1 A, B Cytotoxin 1 8626
43 1KU6 2 B FASCICULIN 2 8618
44 5HBT 4 A Alpha-bungarotoxin isoform V31 UNP residues 22-95 8616
45 4OM4 1 A, B, C, D, E Cytotoxin 2 UNP residues 22-81 8656
46 4BDT 2 B FASCICULIN-2 8618
47 2ABX 1 A, B ALPHA-BUNGAROTOXIN 8616
48 1F8U 2 B FASCICULIN II 8618
49 2X8B 2 B FASCICULIN-2 8618
50 1B41 2 B FASCICULIN-2 SINGLE DOMAIN 8618
51 5HBV 1 A Alpha-bungarotoxin isoform V31 UNP residues 22-95 8616
52 1MAH 2 F FASCICULIN 2 8618
53 4ZQY 1 A, B, C Ringhalexin 8626
54 4UY2 2 C, D ALPHA-BUNGAROTOXIN ISOFORM V31 8616
55 1FSS 2 B FASCICULIN II 8618
56 4HQP 2 F, G, H, I, J Alpha-bungarotoxin isoform V31 8616
57 1YI5 2 F, G, H, I, J Long neurotoxin 1 84476
58 5NQ4 1 A Cytotoxin 1 8657
59 5LUE 1 A VC-1=CYTOTOXIN 8657
60 5T8A 1 A Cytotoxin 1 This toxin features the presence of an additional Met-residue at the N-terminus, compared to the native toxin, isolated from cobra venom 8657
61 2MJ4 1 A Short neurotoxin 1 8657
62 2MJ0 1 A Weak tryptophan-containing neurotoxin 8649
63 2LA1 1 A Mambin 8623
64 2JQP 1 A Weak toxin 1 sequence database residues 22-86 92438
65 1ZAD 1 A Cytotoxin 1 8657
66 1W6B 1 A LONG NEUROTOXIN 1 8657
67 1VYC 1 A BUCAIN BELONGS TO THE SNAKE TOXIN FAMILY, ORPHAN GROUP III SUBFAMILY 92438
68 1RL5 1 A Cytotoxin 1 8657
69 1RGJ 1 A long neurotoxin 1 8616
70 1MR6 1 A neurotoxin 8616
71 1LXG 1 A Long neurotoxin 1 8649
72 1LXH 1 A LONG NEUROTOXIN 1 8649
73 1LJZ 1 A alpha-Bungarotoxin 8616
74 1L4W 1 A alpha-Bungarotoxin 8616
75 1KL8 1 A ALPHA-BUNGAROTOXIN 8616
76 1KFH 1 A alpha-Bungarotoxin 8616
77 1KC4 1 A alpha-bungarotoxin 8616
78 1JGK 1 A CANDOXIN 92438
79 1JE9 1 A SHORT NEUROTOXIN II 8649
80 1JBD 1 A LONG NEUROTOXIN 1 8616
81 1IK8 1 A LONG NEUROTOXIN 1 8616
82 1IKC 1 A long neurotoxin 1 8616
83 1HAA 1 A ALPHA-BUNGAROTOXIN ALPHA-NEUROTOXIN 8616
84 1HAJ 1 A ALPHA-BUNGAROTOXIN ALPHA-NEUROTOXIN 8616
85 1IDG 1 A ALPHA-BUNGAROTOXIN 8616
86 1IDH 1 A ALPHA-BUNGAROTOXIN 8616
87 1IDI 1 A ALPHA-BUNGAROTOXIN 8616
88 1IDL 1 A ALPHA-BUNGAROTOXIN 8616
89 1I02 1 A CARDIOTOXIN-3 8656
90 1HOY 1 A LONG NEUROTOXIN 1 8616
91 1G6M 1 A SHORT NEUROTOXIN 1 8649
92 1FFJ 1 A CYTOTOXIN 2 1 8657
93 1CHV 1 S PROTEIN (CARDIOTOXIN ANALOGUE V) 8656
94 1CCQ 1 A PROTEIN (CYTOTOXIN 2) 8657
95 1CB9 1 A PROTEIN (CYTOTOXIN 2) 8657
96 1BXP 1 A ALPHA-BUNGAROTOXIN 8616
97 2BTX 1 A ALPHA-BUNGAROTOXIN 8616
98 2NBT 1 A, B NEURONAL BUNGAROTOXIN 8616
99 1KBS 1 A CTX IV 8656
100 1KBT 1 A CTX IV 8656
101 1TXA 1 A TOXIN B 8665
102 1TXB 1 A TOXIN B 8665
103 1LSI 1 A LSIII 8631
104 1TFS 1 A TOXIN FS2 8624
105 1CXO 1 A CARDIOTOXIN GAMMA 8654
106 1DRS 1 A DENDROASPIN 8623
107 2CDX 1 A CARDIOTOXIN CTX I 8656
108 1CXN 1 A CARDIOTOXIN GAMMA 8654
109 1COD 1 A COBROTOXIN 8656
110 1COE 1 A COBROTOXIN 8656
111 1ERA 1 A ERABUTOXIN B 8631
112 1FRA 1 A ERABUTOXIN B 8631
113 1CRE 1 A CARDIOTOXIN II 8656
114 1CRF 1 A CARDIOTOXIN II 8656
115 2CRS 1 A CARDIOTOXIN III 8656
116 2CRT 1 A CARDIOTOXIN III 8656
117 1ABT 1 A ALPHA-BUNGAROTOXIN 8616
118 1CVO 1 A CARDIOTOXIN V 8656
119 1NOR 1 A NEUROTOXIN II 8657
120 2CCX 1 A CARDIOTOXIN CTX IIB 8644
121 1NEA 1 A TOXIN ALPHA 8654
122 1NTX 1 A ALPHA-NEUROTOXIN 8624
123 1CTX 1 A ALPHA-COBRATOXIN 84476
124 1NXB 1 A NEUROTOXIN B 8631