Sequence Similarity Clusters for the Entities in PDB 1IJQ

Entity #1 | Chains: A,B
LOW-DENSITY LIPOPROTEIN RECEPTOR protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36157
95 % 1 1 28489 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 27507
70 % 1 1 24835
50 % 1 1 21323
40 % 1 1 18838
30 % 2 4 9175

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.