Sequence Similarity Clusters for the Entities in PDB 1IJJ

Entity #1 | Chains: A,B
ACTIN, ALPHA SKELETAL MUSCLE protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 78 150 8
95 % 114 205 9 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 117 211 9
70 % 121 216 11
50 % 121 223 15
40 % 133 242 25
30 % 145 262 39

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures