Sequence Similarity Clusters for the Entities in PDB 1IJG

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
UPPER COLLAR PROTEIN protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 1664
95 % 2 4 1376 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 2 4 1403
70 % 2 4 1423
50 % 2 4 1471
40 % 2 4 1482
30 % 2 4 1453

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures