Sequence Similarity Clusters for the Entities in PDB 1IJF

Entity #1 | Chains: A
elongation factor 1-alpha protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 11066
95 % 6 6 10935 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 6 6 10789
70 % 7 8 7029
50 % 13 16 2553
40 % 13 16 2502
30 % 58 92 383
Entity #2 | Chains: B
elongation factor 1-beta protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 23313
95 % 6 6 12894 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 6 6 12685
70 % 6 6 11912
50 % 6 7 8894
40 % 6 7 8143
30 % 6 7 7167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.