Sequence Similarity Clusters for the Entities in PDB 1IJF

Entity #1 | Chains: A
elongation factor 1-alpha protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10086
95 % 7 7 10149 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 7 7 10026
70 % 8 9 6474
50 % 14 17 2440
40 % 14 17 2413
30 % 59 93 398
Entity #2 | Chains: B
elongation factor 1-beta protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 15999
95 % 7 7 10825 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 7 7 10681
70 % 7 7 10133
50 % 7 8 8403
40 % 7 8 7697
30 % 7 8 6790

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.