Sequence Similarity Clusters for the Entities in PDB 1IJF

Entity #1 | Chains: A
elongation factor 1-alpha protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10208
95 % 7 7 10255 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 7 7 10126
70 % 8 9 6545
50 % 14 17 2484
40 % 14 17 2454
30 % 61 96 393
Entity #2 | Chains: B
elongation factor 1-beta protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16219
95 % 7 7 10938 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 7 7 10789
70 % 7 7 10238
50 % 7 8 8486
40 % 7 8 7773
30 % 7 8 6852

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures