Sequence Similarity Clusters for the Entities in PDB 1IJE

Entity #1 | Chains: A
elongation factor 1-alpha protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10097
95 % 5 7 10156 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 5 7 10033
70 % 5 9 6481
50 % 11 17 2441
40 % 11 17 2415
30 % 36 93 398
Entity #2 | Chains: B
elongation factor 1-beta protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 16012
95 % 5 7 10832 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 5 7 10688
70 % 5 7 10140
50 % 5 8 8412
40 % 5 8 7707
30 % 5 8 6797

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.