Sequence Similarity Clusters for the Entities in PDB 1IJE

Entity #1 | Chains: A
elongation factor 1-alpha protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10330
95 % 5 7 10364 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 5 7 10239
70 % 5 9 6607
50 % 11 17 2521
40 % 11 17 2485
30 % 37 96 396
Entity #2 | Chains: B
elongation factor 1-beta protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 16397
95 % 5 7 11058 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 5 7 10915
70 % 5 7 10354
50 % 5 8 8570
40 % 5 8 7855
30 % 5 8 6925

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures