Sequence Similarity Clusters for the Entities in PDB 1IJ9

Entity #1 | Chains: A
VASCULAR CELL ADHESION PROTEIN 1 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15640
95 % 3 3 14653 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 2.5
PDBFlex
90 % 3 3 14383
70 % 3 3 13492
50 % 3 3 11991
40 % 3 3 10859
30 % 3 3 9442

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures