Sequence Similarity Clusters for the Entities in PDB 1IJ9

Entity #1 | Chains: A
VASCULAR CELL ADHESION PROTEIN 1 protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15425
95 % 3 3 14485 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 2.5
PDBFlex
90 % 3 3 14213
70 % 3 3 13328
50 % 3 3 11852
40 % 3 3 10735
30 % 3 3 9330

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.