Sequence Similarity Clusters for the Entities in PDB 1IJ8

Entity #1 | Chains: A,B
AVIDIN protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 12 1991
95 % 7 25 703 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.2
PDBFlex
90 % 8 26 694
70 % 19 39 381
50 % 22 43 420
40 % 22 43 454
30 % 164 201 81

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.