Sequence Similarity Clusters for the Entities in PDB 1IJ8

Entity #1 | Chains: A,B
AVIDIN protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 12 2199
95 % 8 26 701 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.2
PDBFlex
90 % 9 28 677
70 % 20 41 393
50 % 23 45 445
40 % 23 45 471
30 % 165 203 104

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures