Sequence Similarity Clusters for the Entities in PDB 1IJ5

Entity #1 | Chains: A
PLASMODIAL SPECIFIC LAV1-2 PROTEIN protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42928
95 % 1 2 38114 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 2 36363
70 % 1 2 32283
50 % 1 2 27445
40 % 1 2 24073
30 % 1 2 20047

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures