Sequence Similarity Clusters for the Entities in PDB 1IIP

Entity #1 | Chains: A
Cyclophilin 40 protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 35041
95 % 2 2 27924 Flexibility: High
Max RMSD: 15.1, Avg RMSD: 15.1
PDBFlex
90 % 2 2 26956
70 % 2 2 24388
50 % 2 2 20976
40 % 2 2 18579
30 % 3 3 13166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures