Sequence Similarity Clusters for the Entities in PDB 1IIE

Entity #1 | Chains: A,B,C
PROTEIN (HLA-DR ANTIGENS ASSOCIATED INVARIANT CHAIN) protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30496
95 % 1 1 26600
90 % 1 1 25635
70 % 1 1 23158
50 % 1 1 19870
40 % 1 1 17542
30 % 1 1 13826

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1IIE 1 A, B, C PROTEIN (HLA-DR ANTIGENS ASSOCIATED INVARIANT CHAIN) ECTOPLASMIC TRIMERIZATION DOMAIN (RESIDUES 118-192) 9606