Sequence Similarity Clusters for the Entities in PDB 1IID

Entity #1 | Chains: A
Peptide N-myristoyltransferase protein, length: 422 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 2660
95 % 2 6 2971 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 2 6 3025
70 % 2 6 2978
50 % 47 53 441
40 % 78 84 371
30 % 78 84 374
Entity #2 | Chains: O
Octapeptide GLYASKLA protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures