Sequence Similarity Clusters for the Entities in PDB 1IID

Entity #1 | Chains: A
Peptide N-myristoyltransferase protein, length: 422 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 2098
95 % 2 6 2726 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 2 6 2767
70 % 2 6 2747
50 % 39 45 474
40 % 70 76 386
30 % 70 76 386
Entity #2 | Chains: O
Octapeptide GLYASKLA protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.