Sequence Similarity Clusters for the Entities in PDB 1IID

Entity #1 | Chains: A
Peptide N-myristoyltransferase protein, length: 422 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 2068
95 % 2 6 2691 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 2 6 2732
70 % 2 6 2716
50 % 35 41 490
40 % 66 72 392
30 % 66 72 402
Entity #2 | Chains: O
Octapeptide GLYASKLA protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.