Sequence Similarity Clusters for the Entities in PDB 1II8

Entity #1 | Chains: A
Rad50 ABC-ATPase protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27293
95 % 3 3 22712 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 3 3 21974
70 % 3 3 20129
50 % 3 3 17452
40 % 3 3 15563
30 % 3 3 13305
Entity #2 | Chains: B
Rad50 ABC-ATPase protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27595
95 % 3 3 22928 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.8
PDBFlex
90 % 3 3 22181
70 % 3 3 20305
50 % 3 3 17606
40 % 3 3 15701
30 % 3 3 13423

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.