Sequence Similarity Clusters for the Entities in PDB 1II8

Entity #1 | Chains: A
Rad50 ABC-ATPase protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25537
95 % 3 3 21268
90 % 3 3 20592
70 % 3 3 18910
50 % 3 3 16445
40 % 3 3 14682
30 % 3 3 12551
Entity #2 | Chains: B
Rad50 ABC-ATPase protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25822
95 % 3 3 21466
90 % 3 3 20782
70 % 3 3 19072
50 % 3 3 16583
40 % 3 3 14802
30 % 3 3 12654

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.