Sequence Similarity Clusters for the Entities in PDB 1IHM

Entity #1 | Chains: A,B,C
capsid protein protein, length: 530 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28432
95 % 1 1 24876 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 2.3
PDBFlex
90 % 1 1 24030
70 % 1 1 21819
50 % 2 3 8565
40 % 2 3 7692
30 % 2 3 6725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures