Sequence Similarity Clusters for the Entities in PDB 1IHM

Entity #1 | Chains: A,B,C
capsid protein protein, length: 530 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24460
95 % 1 1 20805 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 2.3
PDBFlex
90 % 1 1 20230
70 % 1 1 18636
50 % 1 1 16225
40 % 1 1 14497
30 % 1 1 12441

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.