Sequence Similarity Clusters for the Entities in PDB 1IHK

Entity #1 | Chains: A
GLIA-ACTIVATING FACTOR protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16241
95 % 1 3 12383 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.2
PDBFlex
90 % 1 3 12191
70 % 1 3 11533
50 % 1 3 10302
40 % 1 3 9300
30 % 1 3 7990

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures