Sequence Similarity Clusters for the Entities in PDB 1IHK

Entity #1 | Chains: A
GLIA-ACTIVATING FACTOR protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15630
95 % 1 3 12769 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 3 12557
70 % 1 3 11828
50 % 1 3 10546
40 % 1 3 9562
30 % 1 3 8339

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures