Sequence Similarity Clusters for the Entities in PDB 1IHK

Entity #1 | Chains: A
GLIA-ACTIVATING FACTOR protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15175
95 % 1 3 12409 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 1 3 12206
70 % 1 3 11471
50 % 1 3 10243
40 % 1 3 9287
30 % 1 3 8091

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.