Sequence Similarity Clusters for the Entities in PDB 1IGY

Entity #1 | Chains: A,C
IGG1 INTACT ANTIBODY MAB61.1.3 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 21157
95 % 6 8 4396 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.5
PDBFlex
90 % 50 69 407
70 % 1849 2287 1
50 % 3753 4633 1
40 % 3753 4633 1
30 % 4435 5461 1
Entity #2 | Chains: B,D
IGG1 INTACT ANTIBODY MAB61.1.3 protein, length: 434 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 32642
95 % 1 1 26367
90 % 1 1 25484
70 % 3 3 9452
50 % 10 11 2970
40 % 10 17 1479
30 % 10 17 1458

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.