Sequence Similarity Clusters for the Entities in PDB 1IGT

Entity #1 | Chains: A,C
IGG2A INTACT ANTIBODY - MAB231 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41696
95 % 2 3 18886 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.4
PDBFlex
90 % 4 5 10564
70 % 1585 2416 1
50 % 3213 4892 1
40 % 3213 4892 1
30 % 3759 5759 1
Entity #2 | Chains: B,D
IGG2A INTACT ANTIBODY - MAB231 protein, length: 444 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 33421
95 % 1 1 26963
90 % 1 1 26041
70 % 2 2 19650
50 % 7 11 3056
40 % 7 17 1518
30 % 7 17 1494

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures