Sequence Similarity Clusters for the Entities in PDB 1IGT

Entity #1 | Chains: A,C
IGG2A INTACT ANTIBODY - MAB231 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42313
95 % 2 3 19199 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.4
PDBFlex
90 % 4 5 10775
70 % 1626 2479 1
50 % 3297 5021 1
40 % 3297 5021 1
30 % 3898 5951 1
Entity #2 | Chains: B,D
IGG2A INTACT ANTIBODY - MAB231 protein, length: 444 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 33923
95 % 1 1 27359
90 % 1 1 26421
70 % 2 2 19942
50 % 7 11 3101
40 % 7 17 1535
30 % 7 17 1518

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures