Sequence Similarity Clusters for the Entities in PDB 1IGT

Entity #1 | Chains: A,C
IGG2A INTACT ANTIBODY - MAB231 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41062
95 % 2 3 18594 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.4
PDBFlex
90 % 4 5 10416
70 % 1548 2362 1
50 % 3137 4781 1
40 % 3137 4781 1
30 % 3672 5635 1
Entity #2 | Chains: B,D
IGG2A INTACT ANTIBODY - MAB231 protein, length: 444 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 32894
95 % 1 1 26592
90 % 1 1 25689
70 % 2 2 19377
50 % 7 11 3007
40 % 7 17 1497
30 % 7 17 1471

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures