Sequence Similarity Clusters for the Entities in PDB 1IGT

Entity #1 | Chains: A,C
IGG2A INTACT ANTIBODY - MAB231 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41755
95 % 2 3 18916 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.4
PDBFlex
90 % 4 5 10593
70 % 1592 2426 1
50 % 3228 4913 1
40 % 3228 4913 1
30 % 3774 5780 1
Entity #2 | Chains: B,D
IGG2A INTACT ANTIBODY - MAB231 protein, length: 444 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 33467
95 % 1 1 26996
90 % 1 1 26074
70 % 2 2 19681
50 % 7 11 3064
40 % 7 17 1522
30 % 7 17 1497

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures