Sequence Similarity Clusters for the Entities in PDB 1IGT

Entity #1 | Chains: A,C
IGG2A INTACT ANTIBODY - MAB231 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39362
95 % 2 3 17789 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.4
PDBFlex
90 % 4 5 9968
70 % 1210 1822 2
50 % 2958 4489 1
40 % 2958 4489 1
30 % 3456 5290 1
Entity #2 | Chains: B,D
IGG2A INTACT ANTIBODY - MAB231 protein, length: 444 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31450
95 % 1 1 25432 Flexibility: High
Max RMSD: 17.9, Avg RMSD: 17.9
PDBFlex
90 % 1 1 24604
70 % 2 2 18633
50 % 8 13 2333
40 % 8 19 1310
30 % 8 19 1292

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.