Sequence Similarity Clusters for the Entities in PDB 1IGM

Entity #1 | Chains: L
IGM-KAPPA POT FV (LIGHT CHAIN) protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69361
95 % 1 1 47741
90 % 13 21 788
70 % 95 192 73
50 % 152 309 23
40 % 460 945 5
30 % 516 1074 7
Entity #2 | Chains: H
IGM-KAPPA POT FV (HEAVY CHAIN) protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67998
95 % 1 1 46781
90 % 1 1 44329
70 % 203 394 9
50 % 289 591 7
40 % 461 945 5
30 % 517 1074 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures