Sequence Similarity Clusters for the Entities in PDB 1IGM

Entity #1 | Chains: L
IGM-KAPPA POT FV (LIGHT CHAIN) protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70337
95 % 1 1 48384
90 % 13 21 801
70 % 95 195 75
50 % 152 315 23
40 % 462 963 5
30 % 518 1093 7
Entity #2 | Chains: H
IGM-KAPPA POT FV (HEAVY CHAIN) protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68963
95 % 1 1 47413
90 % 1 1 44905
70 % 205 402 9
50 % 291 603 7
40 % 463 963 5
30 % 519 1093 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures