Sequence Similarity Clusters for the Entities in PDB 1IGJ

Entity #1 | Chains: A,C
IGG2A-KAPPA 26-10 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26945
95 % 82 145 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 89 155 149
70 % 929 2264 1
50 % 1903 4587 1
40 % 1903 4587 1
30 % 2144 5392 1
Entity #2 | Chains: B,D
IGG2A-KAPPA 26-10 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26993
95 % 1 2 22492 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 2 21802
70 % 921 2222 2
50 % 1904 4587 1
40 % 1904 4587 1
30 % 2145 5392 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.