Sequence Similarity Clusters for the Entities in PDB 1IGJ

Entity #1 | Chains: A,C
IGG2A-KAPPA 26-10 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25786
95 % 79 142 146
90 % 81 147 149
70 % 731 1752 2
50 % 1795 4272 1
40 % 1795 4272 1
30 % 2021 5038 1
Entity #2 | Chains: B,D
IGG2A-KAPPA 26-10 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25833
95 % 1 2 21546
90 % 1 2 20904
70 % 869 2066 1
50 % 1796 4272 1
40 % 1796 4272 1
30 % 2022 5038 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.