Sequence Similarity Clusters for the Entities in PDB 1IGI

Entity #1 | Chains: L
IGG2A-KAPPA 26-10 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27639
95 % 94 146 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 102 156 148
70 % 1168 2329 1
50 % 2389 4717 1
40 % 2389 4717 1
30 % 2728 5571 1
Entity #2 | Chains: H
IGG2A-KAPPA 26-10 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27687
95 % 2 2 23085 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 2 2 22363
70 % 1159 2282 2
50 % 2390 4717 1
40 % 2390 4717 1
30 % 2729 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.