Sequence Similarity Clusters for the Entities in PDB 1IGF

Entity #1 | Chains: L,M
IGG1-KAPPA B13I2 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26291
95 % 106 142 152
90 % 111 149 151
70 % 1017 1790 2
50 % 2508 4403 1
40 % 2508 4403 1
30 % 2881 5191 1
Entity #2 | Chains: H,J
IGG1-KAPPA B13I2 FAB (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26245
95 % 1 2 21889
90 % 1 2 21250
70 % 1215 2129 1
50 % 2509 4403 1
40 % 2509 4403 1
30 % 2882 5191 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.