Sequence Similarity Clusters for the Entities in PDB 1IGF

Entity #1 | Chains: L,M
IGG1-KAPPA B13I2 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25752
95 % 106 142 146
90 % 109 147 149
70 % 1000 1750 2
50 % 2439 4268 1
40 % 2439 4268 1
30 % 2794 5034 1
Entity #2 | Chains: H,J
IGG1-KAPPA B13I2 FAB (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25706
95 % 1 2 21459
90 % 1 2 20832
70 % 1182 2064 1
50 % 2440 4268 1
40 % 2440 4268 1
30 % 2795 5034 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.