Sequence Similarity Clusters for the Entities in PDB 1IGA

Entity #1 | Chains: A,B
IGA1 protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 5296
95 % 4 4 5612
90 % 6 6 3740
70 % 6 6 3668
50 % 6 6 3590
40 % 20 20 1260
30 % 21 21 1213
Entity #2 | Chains: C,D
IGA1 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 3103
95 % 7 7 3415
90 % 778 778 2
70 % 2537 2538 1
50 % 5150 5152 1
40 % 5803 5806 1
30 % 7229 7240 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures