Sequence Similarity Clusters for the Entities in PDB 1IG4

Entity #1 | Chains: B,C
5'-D(*GP*TP*AP*TP*CP*(5CM)P*GP*GP*AP*TP*AP*C)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Methyl-CpG Binding Protein protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48419
95 % 1 2 36169
90 % 1 2 34537
70 % 1 2 30700
50 % 1 2 26248
40 % 1 2 23151
30 % 1 2 19625

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures