Sequence Similarity Clusters for the Entities in PDB 1IFR

Entity #1 | Chains: A
Lamin A/C protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46076
95 % 1 3 13167 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 1 3 12947
70 % 1 3 12182
50 % 1 7 4918
40 % 1 7 4660
30 % 1 7 4266

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1IFR 1 A Lamin A/C residues 436-552 9606
2 3GEF 1 A, B, C, D Lamin-A/C Lamin A/C globular domain 9606
3 3UMN 1 A, B, C Lamin-B1 Globular Tail Domain, UNP residues 428-550 9606
4 3JT0 1 A, B Lamin-B1 residues 426-558 9606
5 2LLL 1 A Lamin-B2 UNP residues 449-569 9606
6 2KPW 1 A Lamin-B1 sequence database residues 439-549 9606
7 1IVT 1 A Lamin A/C C-terminal domain 9606