Sequence Similarity Clusters for the Entities in PDB 1IFR

Entity #1 | Chains: A
Lamin A/C protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45501
95 % 1 3 13003 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.1
PDBFlex
90 % 1 3 12789
70 % 1 3 12046
50 % 1 7 4852
40 % 1 7 4596
30 % 1 7 4211

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1IFR 1 A Lamin A/C residues 436-552 9606
2 3GEF 1 A, B, C, D Lamin-A/C Lamin A/C globular domain 9606
3 3UMN 1 A, B, C Lamin-B1 Globular Tail Domain, UNP residues 428-550 9606
4 3JT0 1 A, B Lamin-B1 residues 426-558 9606
5 2LLL 1 A Lamin-B2 UNP residues 449-569 9606
6 2KPW 1 A Lamin-B1 sequence database residues 439-549 9606
7 1IVT 1 A Lamin A/C C-terminal domain 9606