Sequence Similarity Clusters for the Entities in PDB 1IFR

Entity #1 | Chains: A
Lamin A/C protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 23402
95 % 1 4 9441 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 1 4 9336
70 % 1 4 8970
50 % 1 8 4599
40 % 1 8 4347
30 % 1 8 3916

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1IFR 1 A Lamin A/C residues 436-552 9606
2 6GHD 3 B, F Prelamin-A/C 9606
3 1IVT 1 A Lamin A/C C-terminal domain 9606