Sequence Similarity Clusters for the Entities in PDB 1IFQ

Entity #1 | Chains: A,B
vesicle trafficking protein Sec22b protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43566
95 % 1 1 32779 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 31361
70 % 1 1 28050
50 % 1 1 23983
40 % 1 1 21104
30 % 1 1 17867

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.