Sequence Similarity Clusters for the Entities in PDB 1IF0

Entity #1 | Chains: A,B,C,D,E,F,G
PROTEIN (MAJOR CAPSID PROTEIN GP5) protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 785
95 % 10 10 692
90 % 10 10 721
70 % 10 10 768
50 % 10 10 823
40 % 10 10 861
30 % 10 10 849

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures