Sequence Similarity Clusters for the Entities in PDB 1IEB

Entity #1 | Chains: A,C
MHC CLASS II I-EK protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 12937
95 % 10 15 1720
90 % 69 97 232
70 % 69 97 264
50 % 100 149 176
40 % 100 149 189
30 % 205 310 94
Entity #2 | Chains: B,D
MHC CLASS II I-EK protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39217
95 % 10 15 1711
90 % 10 15 1746
70 % 95 140 161
50 % 100 149 175
40 % 100 149 188
30 % 206 310 94

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.