Sequence Similarity Clusters for the Entities in PDB 1IEB

Entity #1 | Chains: A,C
MHC CLASS II I-EK protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 12216
95 % 10 15 1618
90 % 65 92 230
70 % 65 92 263
50 % 94 142 177
40 % 94 142 191
30 % 193 296 99
Entity #2 | Chains: B,D
MHC CLASS II I-EK protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37206
95 % 10 15 1609
90 % 10 15 1641
70 % 89 133 164
50 % 94 142 176
40 % 94 142 190
30 % 194 296 99

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.