Sequence Similarity Clusters for the Entities in PDB 1IEA

Entity #1 | Chains: A,C
MHC CLASS II I-EK protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 12316
95 % 3 15 1639
90 % 28 92 238
70 % 28 92 271
50 % 37 142 181
40 % 37 142 194
30 % 73 296 100
Entity #2 | Chains: B,D
MHC CLASS II I-EK protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 1651
95 % 3 15 1630
90 % 3 15 1660
70 % 36 133 168
50 % 37 142 180
40 % 37 142 193
30 % 74 296 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.