Sequence Similarity Clusters for the Entities in PDB 1IE7

Entity #1 | Chains: A
UREASE GAMMA SUBUNIT protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 8382
95 % 10 14 5092 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 10 14 5120
70 % 15 45 1275
50 % 15 47 1085
40 % 15 47 1098
30 % 15 47 1086
Entity #2 | Chains: B
UREASE BETA SUBUNIT protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 14 4565
95 % 10 14 5055 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 10 14 5089
70 % 10 14 4964
50 % 10 14 4730
40 % 10 14 4454
30 % 10 14 4019
Entity #3 | Chains: C
UREASE ALPHA SUBUNIT protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 8170
95 % 10 14 4855 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 10 14 4898
70 % 10 14 4772
50 % 15 50 947
40 % 15 50 968
30 % 15 50 954

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures